BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B07SP1|AL425642
(720 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1667 1393 0.0
>3x_Contig1667
Length = 12071
Score = 1393 bits (696), Expect = 0.0
Identities = 709/720 (98%)
Strand = Plus / Minus
Query: 1 gatccagaaaattgaagaccaacctgctatatttgatgtgaaagttgttaccaccatgga 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3458 gatccagaaaattgaagaccaacctgctatatttgatgtgaaagttgtcaccaccatgga 3399
Query: 61 tgcgataatgaagaaaatggatacccaaaaatgggttcsacgccataatttctgcsattt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 3398 tgcgataatgaagaaaatggatacccaaaaatgggttccacgccataatttctgccattt 3339
Query: 121 ggccgtcgccatatagttatsaatgcatagcaatagatcatcatacatttgaattctctc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3338 ggccgtcgccatatagttatcaatgcatagcaatagatcatcatacatttgaattctctc 3279
Query: 181 taacgcctgttccttagccattgagtgatccgtttcctggagtatatgaggtttctggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3278 taacgcctgttccttagccattgagtgatccgtttcctggagtatatgaggtttctggtc 3219
Query: 241 cgtttgtgtgagatcttttaactgtagtagaatactgtatgcgaaatgatcactaaagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3218 cgtttgtgtgagatcttttaactgtagtagaatactgtatgcgaaatgatcactaaagct 3159
Query: 301 tcctatatttggratagtttctgtgaatgtracttttgcatccaatgtgtgaagtgtgtt 360
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3158 tcctatatttggaatagtttctgtgaatgtaacttttgcatccaatgtgtgaagtgtgtt 3099
Query: 361 tgartctatcaatgcatagtctagacgacatgcttcatgtgcacctctgcttgctctcca 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3098 tgaatctatcaatgcatagtctagacgacatgcttcatgtgcacctctgcttgctctcca 3039
Query: 421 agtatttaaagtagaatcacatgtagttccgccatatgtgatttggttagctggcgataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3038 agtatttaaagtagaatcacatgtagttccgccatatgtgatttggttagctggcgataa 2979
Query: 481 tgcagctatatctttcaaatcttgaactccaaacttttgttcccatgaatctacttgacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2978 tgcagctatatctttcaaatcttgaactccaaacttttgttcccatgaatctacttgacc 2919
Query: 541 ggcctcaattgttaarratttatgtggcaatgatcctggtcttgaattcaagtsacctac 600
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2918 ggcctcaattgttaaaaatttatgtggcaatgatcctggtcttgaattcaagtcacctac 2859
Query: 601 cacaacaacagagtagccagccttcttatatagcttgaccaatttactaaratcccacga 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2858 cacaacaacagagtagccagccttcttatatagcttgaccaatttactaaaatcccacga 2799
Query: 661 ttgacatgctctatggcactcgtatgctgcatcaccagtcaaagcataaggcgcatgcat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2798 ttgacatgctctatggcactcgtatgctgcatcaccagtcaaagcataaggcgcatgcat 2739
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4169
Number of Sequences: 1807
Number of extensions: 4169
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 720
length of database: 10,358,551
effective HSP length: 16
effective length of query: 704
effective length of database: 10,329,639
effective search space: 7272065856
effective search space used: 7272065856
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)